Function Annoation Quick View
Suggestions to imetalabca@gmail.com
Report generated @2019-09-06 19:52:59
1 Intro
This report provides some basic description and visualization of the MetaLab function results. The report is based on the function.csv, without defined experimental design/grouping information. Users can use this to quickly check the functional profile of the dataset.
2 Sample overview
| Protein groups annotation | Number (percentage) |
|---|---|
| Protein groups in your sample | 7501 |
| Protein groups with COG annotation: | 6918 ( 92% ) |
| Protein groups with NOG annotation: | 7193 ( 96% ) |
| Protein groups with KEGG annotation: | 4926 ( 66% ) |
| Protein groups with GOBP annotation: | 6414 ( 86% ) |
| Protein groups with GOCC annotation: | 4313 ( 57% ) |
| Protein groups with GOMF annotation: | 6204 ( 83% ) |
| Unique COG accessions annotated: | 1041 |
| Unique NOG accessions annotated: | 1432 |
| Unique KEGG accessions annotated: | 103 |
| Meta/grouping info provided: | V1, V3, V2 |
3 Overview with pie charts
3.1 Overview of COG categories
The figure below displays the composition of COG categories in each of your sample. Intensities in the pie chart are based on summed proteinGroup intensities across all samples.
3.2 Overview of NOG categories
The figure below displays the composition of NOG categories in each of your sample. Intensities in the pie chart are based on summed proteinGroup intensities across all samples.
3.3 Overview of KEGG pathways
The figure below displays the composition of KEGG pathways in each of your sample. Intensities in the pie chart are based on summed proteinGroup intensities across all samples.
4 Functional composition in each sample
4.1 COG composition in each sample
The figure below displays the composition of COG categories in each of your sample. Intensities in the bar plot are based on summed proteinGroup intensities corresponding to each category.
4.2 NOG composition in each sample
Similar to the COG summary, the figure below displays the composition of NOG categories in each of your sample.
4.3 KEGG composition in each sample
The figure below displays the composition of KEGG pathways in each of your sample.
5 Heatmap of functional composition
5.1 Heatmap of COG composition
5.2 Heatmap of NOG composition
5.3 Heatmap of KEGG composition
